[Scion] Issue with installation of SCION Apps
Mateusz Kowalski
kmateusz at inf.ethz.ch
Tue Sep 10 14:49:42 CEST 2019
Thanks. Please note there is a lot of OOM kills affecting SCION services
running on your machine. In this state the installation will be very
unstable and you will see lots of problems. As a first resort you should
look into increasing available memory on your system and if not
possible, at least enabling swap so processes are not killed (however
the latter will have a gross impact on the performance).
Best,
Mateusz
On 10/09/2019 14:29, Siddharth Mehrotra wrote:
> # git clone -vvv https://github.com/netsec-ethz/rains -> Receiving
> objects: 100% (9926/9926), 84.58 MiB | 26.21 MiB/s, done.
> # free -h -> total used free shared buff/cache available
> Mem: 2.0G 1.5G 237M 3.1M
> 270M 339M
> Swap: 0B 0B 0B
> # lscpu ->
> Architecture: x86_64
> CPU op-mode(s): 32-bit, 64-bit
> Byte Order: Little Endian
> CPU(s): 2
> On-line CPU(s) list: 0,1
> Thread(s) per core: 1
> Core(s) per socket: 2
> Socket(s): 1
> NUMA node(s): 1
> Vendor ID: GenuineIntel
> CPU family: 6
> Model: 142
> Model name: Intel(R) Core(TM) i5-8250U CPU @ 1.60GHz
> Stepping: 10
> CPU MHz: 1800.002
> BogoMIPS: 3600.00
> Hypervisor vendor: KVM
> Virtualization type: full
> L1d cache: 32K
> L1i cache: 32K
> L2 cache: 256K
> L3 cache: 6144K
> NUMA node0 CPU(s): 0,1
> Flags: fpu vme de pse tsc msr pae mce cx8 apic sep
> mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx
> rdtscp lm constant_tsc rep_good nopl xtopology nonstop_tsc pni
> pclmulqdq ssse3 cx16 pcid sse4_1 sse4_2 x2apic movbe popcnt aes xsave
> avx rdrand hypervisor lahf_lm abm 3dnowprefetch fsgsbase avx2 invpcid
> rdseed clflushopt
>
> # cat /proc/meminfo ->
> MemTotal: 2048132 kB
> MemFree: 222392 kB
> MemAvailable: 327732 kB
> Buffers: 10952 kB
> Cached: 217368 kB
> SwapCached: 0 kB
> Active: 1649868 kB
> Inactive: 68420 kB
> Active(anon): 1492832 kB
> Inactive(anon): 2780 kB
> Active(file): 157036 kB
> Inactive(file): 65640 kB
> Unevictable: 3652 kB
> Mlocked: 3652 kB
> SwapTotal: 0 kB
> SwapFree: 0 kB
> Dirty: 180 kB
> Writeback: 0 kB
> AnonPages: 1493632 kB
> Mapped: 56156 kB
> Shmem: 3216 kB
> Slab: 49688 kB
> SReclaimable: 28860 kB
> SUnreclaim: 20828 kB
> KernelStack: 13488 kB
> PageTables: 21296 kB
> NFS_Unstable: 0 kB
> Bounce: 0 kB
> WritebackTmp: 0 kB
> CommitLimit: 1024064 kB
> Committed_AS: 9915072 kB
> VmallocTotal: 34359738367 kB
> VmallocUsed: 0 kB
> VmallocChunk: 0 kB
> HardwareCorrupted: 0 kB
> AnonHugePages: 899072 kB
> CmaTotal: 0 kB
> CmaFree: 0 kB
> HugePages_Total: 0
> HugePages_Free: 0
> HugePages_Rsvd: 0
> HugePages_Surp: 0
> Hugepagesize: 2048 kB
> DirectMap4k: 63424 kB
> DirectMap2M: 2033664 kB
>
> # dmesg -T |grep Kill
> [Tue Sep 10 11:26:47 2019] Out of memory: Kill process 2407
> (beacon_server) score 17 or sacrifice child
> [Tue Sep 10 11:26:47 2019] Killed process 2407 (beacon_server)
> total-vm:946396kB, anon-rss:34728kB, file-rss:0kB
> [Tue Sep 10 11:26:49 2019] Out of memory: Kill process 2974
> (beacon_server) score 16 or sacrifice child
> [Tue Sep 10 11:26:49 2019] Killed process 2974 (beacon_server)
> total-vm:948464kB, anon-rss:34144kB, file-rss:0kB
> [Tue Sep 10 11:26:49 2019] Out of memory: Kill process 3548
> (beacon_server) score 17 or sacrifice child
> [Tue Sep 10 11:26:49 2019] Killed process 3533 (beacon_server)
> total-vm:948464kB, anon-rss:34248kB, file-rss:604kB
>
> *I tried again with ./deps.sh & it works now. with complete installation.*
> On Mon, Sep 9, 2019 at 9:44 AM Mateusz Kowalski <kmateusz at inf.ethz.ch
> <mailto:kmateusz at inf.ethz.ch>> wrote:
>
> Hi guys,
>
> `index-pack died of signal 9` in most of the cases suggest running
> out
> of memory on the underlying system.
>
> @Siddharth, can you please send output of the following set of
> commands?
>
> ```
> # git clone -vvv https://github.com/netsec-ethz/rains
> # free -h
> # lscpu
> # cat /proc/meminfo
> # dmesg -T |grep Kill
> ```
>
> Cheers,
> Mateusz
>
> On 08/09/2019 20:59, Juan A. García-Pardo wrote:
> > Hi Siddharth,
> > The execution of `deps.sh` failed, look at that message saying
> "error:
> > index-pack died of signal 9"
> > Where is it failing? in `git clone` ? Where (which platform) are you
> > running this?
> > Thanks,
> >
> > Juan A.
> >
> >
> > On Fri, Sep 6, 2019 at 4:32 PM Siddharth Mehrotra
> <the4daspect at gmail.com <mailto:the4daspect at gmail.com>>
> > wrote:
> >
> >> Hi,
> >>
> >> While installing SCION-Apps, following error appeared on
> running ./deps.sh.
> >> Is there any issue with this?
> >>
> >>
> ubuntu at scionlab-ffaa-1-c28:~/go/src/github.com/netsec-ethz/scion-apps$
> <http://github.com/netsec-ethz/scion-apps$>
> >> ./deps.sh
> >> + printf '\n### Getting govendor ###\n'
> >>
> >> ### Getting govendor ###
> >> + grep v1.0.8
> >> + govendor -version
> >> + printf '\n### Getting vendor libraries\n'
> >>
> >> ### Getting vendor libraries
> >> + govendor sync -v
> >> fetch "github.com/docker/docker/pkg/term
> <http://github.com/docker/docker/pkg/term>"
> >> fetch "github.com/docker/docker/pkg/term/windows
> <http://github.com/docker/docker/pkg/term/windows>"
> >> fetch "github.com/netsec-ethz/rains/internal/pkg/algorithmTypes
> <http://github.com/netsec-ethz/rains/internal/pkg/algorithmTypes>"
> >> # cd .; git clone https://github.com/netsec-ethz/rains
> >> /home/ubuntu/go/.cache/govendor/github.com/netsec-ethz/rains
> <http://github.com/netsec-ethz/rains>
> >> Cloning into
> '/home/ubuntu/go/.cache/govendor/github.com/netsec-ethz/rains
> <http://github.com/netsec-ethz/rains>
> >> '.
> >> ..
> >> error: index-pack died of signal 9
> >> fatal: index-pack failed
> >> fetch "github.com/netsec-ethz/rains/internal/pkg/cbor
> <http://github.com/netsec-ethz/rains/internal/pkg/cbor>"
> >> # cd .; git clone https://github.com/netsec-ethz/rains
> >> /home/ubuntu/go/.cache/govendor/github.com/netsec-ethz/rains
> <http://github.com/netsec-ethz/rains>
> >> Cloning into
> '/home/ubuntu/go/.cache/govendor/github.com/netsec-ethz/rains
> <http://github.com/netsec-ethz/rains>
> >> '.
> >> ..
> >> error: index-pack died of signal 9
> >> fatal: index-pack failed
> >> fetch "github.com/netsec-ethz/rains/internal/pkg/connection
> <http://github.com/netsec-ethz/rains/internal/pkg/connection>"
> >> # cd .; git clone https://github.com/netsec-ethz/rains
> >> /home/ubuntu/go/.cache/govendor/github.com/netsec-ethz/rains
> <http://github.com/netsec-ethz/rains>
> >> Cloning into
> '/home/ubuntu/go/.cache/govendor/github.com/netsec-ethz/rains
> <http://github.com/netsec-ethz/rains>
> >> '.
> >> ..
> >> error: index-pack died of signal 9
> >> fatal: index-pack failed
> >> fetch
> "github.com/netsec-ethz/rains/internal/pkg/datastructures/bitarray
> <http://github.com/netsec-ethz/rains/internal/pkg/datastructures/bitarray>"
> >>
> >> Error appeared while executing *make install command*
> >>
> >>
> ubuntu at scionlab-ffaa-1-c28:~/go/src/github.com/netsec-ethz/scion-apps$
> <http://github.com/netsec-ethz/scion-apps$>
> >> make
> >> install
> >> cd helloworld/ && go build
> >> ../lib/scionutil/hosts.go:27:2: cannot find package "
> >> github.com/netsec-ethz/rains/pkg/rains
> <http://github.com/netsec-ethz/rains/pkg/rains>" in any of:
> >> /home/ubuntu/go/src/
> >>
> >>
> github.com/netsec-ethz/scion-apps/vendor/github.com/netsec-ethz/rains/pkg/rains
> <http://github.com/netsec-ethz/scion-apps/vendor/github.com/netsec-ethz/rains/pkg/rains>
> >> (vendor tree)
> >>
> /usr/local/go/src/github.com/netsec-ethz/rains/pkg/rains
> <http://github.com/netsec-ethz/rains/pkg/rains> (from
> >> $GOROOT)
> >>
> /home/ubuntu/go/src/github.com/netsec-ethz/rains/pkg/rains
> <http://github.com/netsec-ethz/rains/pkg/rains> (from
> >> $GOPATH)
> >> Makefile:24: recipe for target 'helloworld/helloworld' failed
> >> make: *** [helloworld/helloworld] Error 1
> >>
> >> In this scenario SCION is running on perfectly and I am unable
> to install
> >> SCION - Apps on the ubuntu machine.
> >>
> >> Thanks,
> >> Siddharth
> >> _______________________________________________
> >> Scion mailing list
> >> Scion at lists.inf.ethz.ch <mailto:Scion at lists.inf.ethz.ch>
> >> https://lists.inf.ethz.ch/mailman/listinfo/scion
> >>
> > _______________________________________________
> > Scion mailing list
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